Table 4

List of primers and probes29

Primers and probesNucleotide sequence positions
EBNA2, Epstein-Barr virus nuclear antigen 2; LMP-1, latent membrane protein 1.
EBNA2
    gen 1: 5′ AGGGATGCCTGGACACAA3′44410–48827
    gen 2: 5′ GTGCTGGTGCTGCTGGTGG3′49410–49391
EBNA2 subtype 1
    A1: 5′ TCTTGATAGGGATCCGCTAGGATA 3′48839–48862
    A2: 5′ ACCGTGGTTCTGGACTATCTGGATC 3′49335–49311
    Probe: 5′ CTCTGTCACAACCGAGGCTTACC 3′49048–49070
EBNA2 subtype 21
    B1: 5′ CATGGTAGCCTTAGGACATA 3′
    B2: 5′ AGACTTAGTTGATGCCCTAG 3′
    Probe: 5′ AGGCCTACTCTTCCTCAACCCAG 3′
BamHI-F
    F1: 5′ GGAACTGAGCCAGTAGGATA 3′149–173
    F2: 5′ AATGTTCTGCAGGGTAACGG 3′980–960
LMP-130
    F1: 5′ GTGGGGGTCGTCATCATCTC 3′168190–168209
    R2: 5′ CGGAAGAGGTTGAAAACAAA 3′168350–168331
    Probe: 5′ GGCGGGCCCTGGTCACCTCC 3′168311–168330