Table 1

Primer sequences, fragment sizes in base pairs (bp), and positions in RB1

PrimerSequence (5′→3′)Expected fragment size in bp and RB1 positionReference
Positions refer to the normal RB1 sequence (GenBank L11910). Reference indicates primer design in: 1, this work; 2, Lohmann and colleagues7; 3, Lohmann et al.6
F, forward primer; R, reverse primer.
1 FCTCCCCGGCGCTCCTCCACAGC231 (2010–2240) 1
1 RGGGCGCCCTTCCCGCGTGAG 2
2 FAACAAGTATGTACTGAATCAATTTG281 (5355–5635) 2
2 RCTATCTTTCAATTTTTGTATAGTGA 1
3 FGCGAATTCGGAGGTTATATTCAAAAGAA116 (39446–39561) 3
3 RGCGAATTCTGATTTCGTATGTTTTTC 3
4 FACAAATTTTTAAGGTTACTGATTTAC237 (41876–42112) 2
4 RCCAGAATCTAATTGTGAACAATGAC 2
5 FAACTACTATGACTTCTAAATTACG221 (44607–44827) 2
5 RCTTAATTTATGAAGTAGCCTGCTA 1
6 FCTGGAAAACTTTCTTTCAGTGATA210 (45734–45943) 1
6 RGGAATTTAGTCCAAAGGAATGCC 2
7 FATACAAAGATCTGAATCTCTAACT226 (56800–57025) 1
7 RCTAGACATTCAATAAGCAACTGC 1
8 FGCGAATTCAAACAGCTGTTATACCCATT143 (59651–59793) 3
8 RGCGAATTCTCATCTATATTACATTCAT 3
9 FGTTCAAGAGTCAAGAGATTAGATT209 (61661–61869) 1
9 RCAATTATCCTCCCTCCACAGTCTCA 1
10 FGCCTCTGTGTGCTGAGAGATGTA277 (64264–64540) 2
10 RAATGATATCTAAAGGTCACTAAGC 1
11 FGATTTTATGAGACAACAGAAGCA244 (65264–65507) 1
11 RATCTGAAACACTATAAAGCCATG 1
12 FAGAGACAAGTGGGAGGCAGTG327 (70120–70446) 1
12 RGATAACTACATGTTAGATAGGAG 1
13 FCTGATTACACAGTATCCTCGAC239 (73704–73942) 2
13 RATACGAACTGGAAAGATGCTGC 2
14 FATTGTGATTTTCTAAAATAGCAGG229 (76377–76605) 1
14 RCAGGATGATCTTGATGCCTTG 1
15–16 FCAATGCTGACACAAATAAGGTT321 (76822–77142) 1
15–16 RAAGAAACACACCACATTTTAACT 1
17 FAGCTCAAGGGTTAATATTTCATAA302 (78032–78333) 1
17 RAATTTGTTAGCCATATGCACATG 1
18 FATGTACCTGGGAAAATTATGCTT258 (149939–150196) 1
18 RCTTTATAGAATGTTACATTGCAC 1
19 FATCTGTGATTCTTAGCCAACTTG250 (153154–153403) 2
19 RAGTCAGCCTAGTTTCAGAGTC 1
20 FCTGGGGGAAAGAAAAGAGTGG328 (156544–156871) 1
20 RGAGGAGAGAAGGTGAAGTGCT 1
21 FGAACAAAACCATGTAATAAAATTCT219 (160676–160894) 1
21 RACCTATGTTATGTTATGGATATGG 2
22 FACTGTTCTTCCTCAGACATTCA182 (161982–162163) 1
22 RTTGGTGGACCCATTACATTAGA 1
23 FCTAATGTAATGGGTCCACCAAA270 (162143–162412) 1
23 RTCCCCCTCTCATTCTTTACTAC 1
24 FTCATCTCTGCAAAATTGTATATGG217 (170309–170525) 1
24 RTATGCAATATGCCTGGATGAGG 1
25 FTTGCTAACTATGAAACACTGGC247 (173647–173893) 1
25 RATGACCATCTCAGCTACTGGA 1
26 FTCGAAAGCATCATAGTTACTGG248 (174279–174526) 1
26 RATGCATAAACAAACCTGCCAACT 1
27 FTGCAAGGTCCTGAGCGCCAT238 (176894–177131) 1
27 RGAGAGACAATGAATCCAGAGGTG 1