Tumour | Genes for which probes are used (FISH) | Transcripts analysed (PCR) |
Alveolar rhabdomyosarcoma | FOXO1 | PAX3–FOXO1, PAX7–FOXO1 |
Alveolar soft part sarcoma | NA | ASPL–TFE3 |
Angiomatoid fibrous histiocytoma | EWSR1 | EWSR1–ATF1 |
Clear cell sarcoma | EWSR1 | EWSR1–ATF1 |
Desmoplastic small round cell tumour | EWSR1 | EWSR1–WT1 |
Endometrial stromal sarcoma | NA | JAZF1–JJAZ1 |
Ewing sarcoma | EWSR1 | EWSR1–FLI1, EWSR1–ERG |
Extraskeletal myxoid chondrosarcoma | EWSR1 | EWSR1–NR4A3, TAF15–NR4A3 |
Infantile fibrosarcoma | NA | ETV6–NTRK3 |
Inflammatory myofibroblastic tumour | ALK | NA |
Low-grade fibromyxoid sarcoma | FUS | FUS–CREB3L2 |
Myxoid/round cell liposarcoma | FUS, DDIT3 | FUS–DDIT3 |
Synovial sarcoma | SYT (SS18) | SSX1–SYT, SSX2–SYT |
NA, not applicable.