Semantic annotation for computational pathology: multidisciplinary experience and best practice recommendations

N Wahab, IM Miligy, K Dodd, H Sahota… - The Journal of …, 2022 - Wiley Online Library
Recent advances in whole‐slide imaging (WSI) technology have led to the development of a
myriad of computer vision and artificial intelligence‐based diagnostic, prognostic, and …

MSI-WES: a simple approach for microsatellite instability testing using whole exome sequencing

HO Ebili, AOJ Agboola, E Rakha - Future Oncology, 2021 - Future Medicine
Aim: To demonstrate that MSI-WES is an accurate testing method for microsatellite instability
(MSI). Materials & methods: Microsatellite-based indels were counted in the variant call …

[HTML][HTML] “Squirrel” primer-based PCR assay for direct and targeted sanger sequencing of short genomic segments

HO Ebili, JC Hassall, W Fadhil… - Journal of …, 2017 - ncbi.nlm.nih.gov
Currently, short DNA segments of sub-100 bp can be sequenced either directly by next-
generation sequencing and pyrosequencing, which are expensive, or indirectly, via Sanger …

Clinicopathological and molecular characteristics of Ku 70/80 expression in Nigerian breast cancer and its potential therapeutic implications

AOJ Agboola, HO Ebili, VO Iyawe, AAF Banjo… - … -Research and Practice, 2017 - Elsevier
Ku 70/80 is a regulator of the Non-Homologous End Joining (NHEJ) roles in
clinicopathological features, and has prognostic significance in breast cancer (BC) in …

[HTML][HTML] Prevalence, predictive factors, and characteristics of osteoporosis in hyperthyroid patients

AO Ale, AO Ogbera, HO Ebili, OL Adeyemo… - International Journal of …, 2018 - hindawi.com
Objective. The osteoporosis in thyroid disorder has the lowest report especially in sub-
Saharan Africa. This study aims to determine the prevalence, predictive factors, and …

QMC-PCRx: a novel method for rapid mutation detection

HO Ebili, J Hassall, A Asiri, H Ham-Karim… - Journal of Clinical …, 2017 - jcp.bmj.com
Aims We previously described the quick multiplex consensus PCR (QMC-PCR) as a method
for rapid mutation screening in low-quality template. QMC-PCR has two-stages: a …

Targeted next generation sequencing reveals a common genetic pathway for colorectal cancers with chromosomal instability and those with microsatellite and …

HA Ham-Karim, HO Ebili, K Bradshaw… - … -Research and Practice, 2019 - Elsevier
Introduction Microsatellite stable sporadic colorectal cancers (CRCs) can be classified as
either tumours with chromosomal instability (CIN+) or tumours that are 'Microsatellite and …

Positive association of PIK3CA mutation with KRAS mutation but not BRAF mutation in colorectal cancer suggests co-selection is gene specific but not pathway …

S Susanti, W Fadhil, S Murtaza, JC Hassall… - Journal of Clinical …, 2019 - jcp.bmj.com
of the association is weak but supports published data. The negative association we
observed of PIK3CA mutation with BRAF mutation suggests that there is no generic co …

A refined method to study gene dosage changes in vitro using CRISPR/Cas9

TP Raposo, HO Ebili, M Ilyas - Journal of Clinical Pathology, 2018 - jcp.bmj.com
Aims Gene dosage can have a major impact on cell biology, although, hitherto, it has been
difficult to study using in vitro models. We sought to refine and accelerate the development of …

[HTML][HTML] Cancer mutation screening: Comparison of high-resolution melt analysis between two platforms

HO Ebili, M Ilyas - ecancermedicalscience, 2015 - ncbi.nlm.nih.gov
High-resolution melt analysis (HRMA) is a cheap and reliable post-polymerase chain
reaction (PCR) cancer mutation screening technique, which is fast gaining clinical …