Table 2

 Genes showing a significant ⩾1.5 fold change between cases and controls in microarray experiments

GenBank accession numberGene name (mRNA)Gene symbolFold difference (array)p ValueTaqman assay IDFold difference (PCR)p Value
mRNA transcripts identified by array and differential expression confirmed by real time PCR are shown in bold.
The table also shows confirmatory Taqman assay numbers (Applied Biosystems UK) and fold changes by real time PCR.
*Transcript variants of particular genes.
NA, not available; NT, not tested; PCR, polymerase chain reaction.
NM_020325ATP binding cassette, subfamily D (ALD), member 4, tv-4 ABCD4 3.3980.00257Hs00245340_m11.8250.0019
NM_002741Protein kinase C-like 1 PRKCL1 2.2880.00438Hs00177028_m12.6691.09×10−5
NM_021134Mitochondrial ribosomal protein L23 MRPL23 2.1750.00135Hs00221699_m14.0321.25×10−6
NM_001558Interleukin 10 receptor α IL10RA 0.2520.00225Hs00387004_m10.3952.34×10−12
NM_006110CD2 antigen (cytoplasmic tail) binding protein 2 CD2BP2 2.3110.00158Hs00272036_m12.4112.6×10−4
NM_000177Gelsolin (amyloidosis, Finnish type) GSN 2.1410.00105Hs00609276_m11.836.23×10−7
NM_006702Neuropathy target esterase NTE 2.8770.00043Hs00198648_m16.4091.31×10−12
NM_002696Polymerase (RNA) II (DNA directed) polypeptide G POLR2G 2.2640.00372Hs00275738_m13.4073.69×10−6
NM_004813Peroxisomal biogenesis factor 16, tv-1 PEX16 3.0040.00213Hs00191337_m11.7580.0126
NM_015636Eukaryotic translation initiation factor 2B, subunit 4δ, tv-1 EIF2B4 2.4140.00125Hs00248984_m11.8821.8×10−5
NM_004953Eukaryotic translation initiation factor 4γ1, tv-5 EIF4G1 3.0810.00177Hs00191933_m12.9647.63×10−13
NM_016476APC11 anaphase promoting complex subunit 11 homologue ANAPC11 3.2780.00219Hs00212858_m12.3663.5×10−6
NM_002598Programmed cell death 2, tv-1 PDCD2 2.0520.00266Hs00751277_sH1.8871.3×10−4
NM_003685KH-type splicing regulatory protein (FUSE binding protein 2) KHSRP 2.3660.00139Hs00269352_m11.640.0022
NM_015399Breast cancer metastasis suppressor 1 BRMS1 2.2460.00219Hs00363036_m11.5980.003
NM_031412*GABA(A) receptor associated protein-like 1 GABARAPL1 2.3580.00046Hs00744468_s11.8380.0097
NM_004655Axin 2 (conductin, axil)AXIN20.3510.00056Hs00610344_m10.7800.023
NM_019051*Mitochondrial ribosomal protein L50MRPL500.4270.00409Hs00745120_s10.8150.0019
NM_005103*Fasciculation and elongation protein ζ1 (zygin I), tv-1FEZ10.3360.00007Hs00192714_m13.4852.3×10−6
NM_002093Glycogen synthase kinase 3βGSK3B2.2940.00238Hs00275656_m10.7630.0015
NM_005098Musculin (activated B cell factor 1)MSC0.3740.00121Hs00231955_m11.1180.036
NM_138325Paired basic amino acid cleaving system 4, tv-6PACE40.4730.00414Hs00159844_m12.0931.2×10−4
NM_003584Dual specificity phosphatase 11DUSP110.3660.00005Hs00186058_m11.7250.134
NM_002483Carcinoembryonic antigen related cell adhesion molecule 6CEACAM60.3010.00048Hs00366002_m11.5850.182
NM_019051*Mitochondrial ribosomal protein L50MRPL500.4270.00409Hs00747929_m11.1360.178
NM_030575Hypothetical protein MGC10334MGC103342.5840.00118Hs00257998_s11.7240.067
NM_031412*GABA(A) receptor associated protein-like 1GABARAPL12.3580.00046Hs00740588_mH0.930.127
NM_007175Chromosome 8 open reading frame 2C8orf22.5540.00206Hs00200360_m11.1980.052
NM_032118Hypothetical protein FLJ12953FLJ129531.9310.00309Hs00259557_m11.1390.203
NM_004879Etoposide induced 2.4 mRNAEI240.450.00181Hs00747550_m11.030.085
NM_079834Secretory carrier membrane protein 4SCAMP-42.80.00069Hs00365263_m11.5860.173
NM_022145Leucine zipper protein FKSG14FKSG140.3450.00205Hs00259557_m11.2120.345
NM_005103*Fasciculation and elongation protein ζ1 (zygin I), tv-1FEZ10.3360.00007Hs00363763_m11.0620.41
NM_003409Zinc finger protein 161 homologueZFP1610.4150.00146NANTNT
NM_007075JM5 proteinJM52.3830.00172NANTNT
NM_005345Heat shock 70 kDa protein 1AHSPA1A3.1980.00003NANTNT
NM_017616Hypothetical protein FLJ20004FLJ200042.6790.00237NANTNT
NM_020663Ras homologue gene family, member JARHJ2.2770.00346NANTNT