Table 4

Analysis of PTEN alterations in gastric adenocarcinoma using different approaches

AuthorNEvents (%)MethodsFindings in detailAssociation with
pTpNUICC stageGrading WHOLauren
Wen et al 20 14418.6
  • SSCP-PCR;

  • DNA- sequencing

  • 15 missense mutations in exons 1, 2, 4 and 9;

  • 9 nonsense mutations in exons 1, 7 and 9

  • 2 1-bp deletions in exon 4

NINI<0.005<0.05NI
Guo et al 21 539.4
  • SSCP-PCR;

  • DNA- sequencing

  • 1 stop mutation in exon 7;

  • 2 point mutations in exons 5 and 7;

  • 1 single base A mutation in exon 5

<0.05* <0.05* <0.005* NINI
Lima et al 22 482.1
  • SSCP-PCR;

  • DNA- sequencing

1 silent point mutation in exon 8NININININI
Li et al 15 605
  • SSCP-PCR;

  • DNA- sequencing

  • One base change in exons 5 and in exon 8

  • One 4-bp deletion in exon 8

  • All only in advanced cases

NININININI
Wang et al 23 6028.3
  • SSCP-PCR;

  • DNA- sequencing

  • 8 missense mutations in exons 3, 4, 5 and, 6;

  • 5 silent mutations in exons 2 and 4;

  • 2 nonsense mutations in exon 3;

  • 1 12-bp deletion in exon 4

NININININI
Sato et al 24 581.7
  • SSCP-PCR;

  • methylation-specific PCR;

  • DNA- sequencing

  • 1 5-bp deletion in intron 7;

  • No mutation in coding regions;

  • No promoter methylation

NININININI
Chang et al 17 150
  • SSCP-PCR;

  • DNA- sequencing

  • No point mutations or base changes;

  • In 33% (5/15) smaller size transcripts

NININININI
Kang et al 25 6639.4Methylation-specific PCR;73% (19/26) in examined cases with negative PTEN expression (IHC staining)<0.01* <0.001* <0.001* NS* NS*
  • * Referring to IHC-staining results.

  • NI, not investigated; NS, not significant.