[HTML][HTML] Multimodal data integration using machine learning improves risk stratification of high-grade serous ovarian cancer

KM Boehm, EA Aherne, L Ellenson, I Nikolovski… - Nature cancer, 2022 - nature.com
Patients with high-grade serous ovarian cancer suffer poor prognosis and variable response
to treatment. Known prognostic factors for this disease include homologous recombination …

[PDF][PDF] Loss of the FAT1 tumor suppressor promotes resistance to CDK4/6 inhibitors via the hippo pathway

Z Li, P Razavi, Q Li, W Toy, B Liu, C Ping, W Hsieh… - Cancer cell, 2018 - cell.com
Summary Cyclin dependent kinase 4/6 (CDK4/6) inhibitors (CDK4/6i) are effective in breast
cancer; however, drug resistance is frequently encountered and poorly understood. We …

Genomic methods identify homologous recombination deficiency in pancreas adenocarcinoma and optimize treatment selection

W Park, J Chen, JF Chou, AM Varghese, KH Yu… - Clinical Cancer …, 2020 - AACR
Purpose: Genomic methods can identify homologous recombination deficiency (HRD).
Rigorous evaluation of their outcome association to DNA damage response–targeted …

Diverse BRCA1 and BRCA2 Reversion Mutations in Circulating Cell-Free DNA of Therapy-Resistant Breast or Ovarian Cancer

B Weigelt, I Comino-Méndez, I de Bruijn, L Tian… - Clinical Cancer …, 2017 - AACR
Purpose: Resistance to platinum-based chemotherapy or PARP inhibition in germline
BRCA1 or BRCA2 mutation carriers may occur through somatic reversion mutations or …

The genetic landscape of endometrial clear cell carcinomas

DF DeLair, KA Burke, P Selenica, RS Lim… - The Journal of …, 2017 - Wiley Online Library
Clear cell carcinoma of the endometrium is a rare type of endometrial cancer that is
generally associated with an aggressive clinical behaviour. Here, we sought to define the …

Precision radiotherapy: reduction in radiation for oropharyngeal cancer in the 30 ROC trial

N Riaz, E Sherman, X Pei, H Schöder… - JNCI: Journal of the …, 2021 - academic.oup.com
Background Patients with human papillomavirus–related oropharyngeal cancers have
excellent outcomes but experience clinically significant toxicities when treated with standard …

[HTML][HTML] The role of APOBEC3B in lung tumor evolution and targeted cancer therapy resistance

DR Caswell, P Gui, MK Mayekar, EK Law, O Pich… - Nature Genetics, 2024 - nature.com
In this study, the impact of the apolipoprotein B mRNA-editing catalytic subunit-like
(APOBEC) enzyme APOBEC3B (A3B) on epidermal growth factor receptor (EGFR)-driven …

Alterations in PTEN and ESR1 promote clinical resistance to alpelisib plus aromatase inhibitors

P Razavi, MN Dickler, PD Shah, W Toy, DN Brown… - Nature Cancer, 2020 - nature.com
Alpelisib is a selective inhibitor of phosphoinositide 3-kinase (PI3K) α, shown to improve
outcomes for PIK3CA-mutant, hormone receptor–positive metastatic breast cancers when …

ARID1A determines luminal identity and therapeutic response in estrogen-receptor-positive breast cancer

G Xu, S Chhangawala, E Cocco, P Razavi, Y Cai… - Nature …, 2020 - nature.com
Mutations in ARID1A, a subunit of the SWI/SNF chromatin remodeling complex, are the most
common alterations of the SWI/SNF complex in estrogen-receptor-positive (ER+) breast …

Unraveling tumor–immune heterogeneity in advanced ovarian cancer uncovers immunogenic effect of chemotherapy

A Jiménez-Sánchez, P Cybulska, KLV Mager… - Nature Genetics, 2020 - nature.com
In metastatic cancer, the degree of heterogeneity of the tumor microenvironment (TME) and
its molecular underpinnings remain largely unstudied. To characterize the tumor–immune …